J. Biochem, 1994, Vol. 115, No. 2 322-327
© 1994 Japanese Biochemical Society
research-article |
A New Method for Testing the Functional Dependence of Unfolding Free Energy Changes on Denaturant Concentration1
Department of Chemistry, Jamia Makes Islamia Jamia Nagar, New Delhi 100 025, India
2To whom correspondence should be addressed.
Denaturations of ribonuclease A, lysozyme, and cytochrome c by guanidine hydrochloride (GdnHCI), urea, and GdnHCl-urea mixture were studied at constant temperature and pH to assess the functional dependence of denaturational free energy change (
GD) on denaturant concentration over an extended GdnHCl concentration range. Conventional analysis of GdnHCl-induced transition curve exhibits a linear plot of
GD, versus [GdnHCl] in the transition zone. To extend
GDmeasurements beyond this narrow concentration range, GdnHCl-induced unfolding was measured in the presence of different concentrations of urea.
GD values from these measurements were corrected for the effect of urea on the free energy change using the appropriate relation. The corrected
GD data were mapped onto the
GD versus [GdnHCl] plot. For each protein, the dependence of free energy change on denaturation was found to be linear over the full GdnHCl concentration.
1This work was supported by a Grant from the Council of Scientific and Industrial Research, India, to Dr. Faizan Ahmad.