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Journal of Biochemistry 2005 137(1):87-93; doi:10.1093/jb/mvi008
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© 2005 The Japanese Biochemical Society

BIOCHEMISTRY

Substrate Specificity and Molecular Cloning of the Lily Endo-ß-Mannosidase Acting on N-Glycan

Akiko Sasaki, Takeshi Ishimizu and Sumihiro Hase*

Department of Chemistry, Graduate School of Science, Osaka University, Toyonaka, Osaka 560-0043

Endo-ß-mannosidase, which hydrolyzes the Manß1-4GlcNAc linkage in the trimannosyl core structure of N-glycans, was recently purified to homogeneity from lily (Lilium longiflorum) flowers as a heterotrimer [Ishimizu, T., Sasaki, A., Okutani, S., Maeda, M., Yamagishi, M., and Hase, S. (2004) J. Biol. Chem. 279, 38555–38562]. Here, we describe the substrate specificity of the enzyme and cloning of its cDNA. The purified enzyme hydrolyzed pyridylaminated (PA-) MannMan{alpha}1-6Manß1-4GlcNAcß1-4GlcNAc (n = 0–2) to MannMan{alpha}1-6Man and GlcNAcß1-4GlcNAc-PA. It did not hydrolyze PA-sugar chains containing Man{alpha}1-3Manß and/or Xylß1-2Manß. The best substrate among the PA-sugar chains tested was Man{alpha}1-6Manß1-4GlcNAcß1-4GlcNAc-PA with a Km value of 1.2 mM. However, the enzyme displayed a marked preference for the corresponding glycopeptide, Man{alpha}1-6Manß1-4GlcNAcß1-4GlcNAc-peptide (Km value 75 µM). These results indicate that the substrate recognition by the enzyme involves the peptide portion attached to the N-glycan. Sequence information on the purified enzyme was used to clone the corresponding cDNA. The monocotyledonous lily enzyme (952 amino acids) displays 68% identity to its dicotyledonous (Arabidopsis thaliana) homologue. Our results show that the heterotrimeric enzyme is encoded by a single gene that gives rise to three polypeptides following posttranslational proteolysis. The enzyme is ubiquitously expressed, suggesting that it has a general function such as processing or degrading N-glycans.

* To whom correspondence should be addressed. Tel: +81-6-6850-5380, Fax: +81-6-6850-5383, E-mail: suhase{at}chem.sci.osaka-u.ac.jp


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