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Journal of Biochemistry 2006 139(4):697-703; doi:10.1093/jb/mvj086
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© 2006 The Japanese Biochemical Society.

Regular Paper

Ultrasensitive DNA Chip: Gene Expression Profile Analysis without RNA Amplification

Kunihisa Nagino*,{dagger}, Osamu Nomura{dagger}, Yuki Takii{dagger}, Akira Myomoto{dagger}, Makiko Ichikawa{dagger}, Fumio Nakamura{dagger}, Masashi Higasa{dagger}, Hideo Akiyama{dagger}, Hitoshi Nobumasa{dagger}, Satoshi Shiojima{ddagger} and Gozoh Tsujimoto{ddagger}

New Frontiers Research Laboratories, Toray Industries, Inc., Kanagawa 248-8555; and Department of Genomic Drug Discovery Science, Graduate School of Pharmaceutical Sciences, Kyoto University, Kyoto 606-8501

* To whom correspondence should be addressed. E-mail: Kunihisa_nagino{at}nts.toray.co.jp

We have developed a new DNA chip whose substrate has a unique minute columnar array structure made of plastic. The DNA chip exhibits ultrahigh sensitivity, up to 100-fold higher than that of reference DNA chips, which makes it possible to monitor gene expression profiles even with very small amounts of RNA (0.1–0.01 µg of total RNA) without amplification. Differential expression ratios obtained with the new DNA chip were validated against those obtained with quantitative real-time PCR assays. This novel microarray technology would be a powerful tool for monitoring gene expression profiles, especially for clinical diagnosis.

{dagger} Present address: Toray Industries, Inc.

{ddagger} Present address: Kyoto University.


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