Journal of Biochemistry Advance Access originally published online on December 11, 2006
Journal of Biochemistry 2007 141(1):85-91; doi:10.1093/jb/mvm010
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© 2006 The Japanese Biochemical Society.
Membrane Topology of Aspartate:Alanine Antiporter AspT from Comamonas testosteroni
1Laboratory of Enzymology; and 2Laboratory of Dairy Microbiology, Department of Molecular and Cell Biology, Graduate School of Agricultural Science, Tohoku University, Sendai, 981-8555 Japan
*To whom correspondence should be addressed. Tel: +81-22-717-8777, Fax: +81-22-717-8778, E-mail: kabe{at}biochem.tohoku.ac.jp
Received October 17, 2006; Accepted November 15, 2006
| Abstract |
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We cloned the aspT gene encoding the L-aspartate:L-alanine antiporter AspTCt in Comamonas testosteroni genomic DNA. Analysis of the nucleotide sequence revealed that C. testosteroni has an asp operon containing aspT upstream of the L-aspartate 4-decarboxylase gene, and that the gene order of the asp operon of C. testosteroni is the inverse of that of Tetragenococcus halophilus. We used proteoliposomes to confirm the transport processes of AspTCt. To elucidate the two-dimensional structure of AspTCt, we analysed its membrane topology by means of alkaline phosphatase (PhoA) and ß-lactamase (BlaM) fusion methods. The fusion analyses revealed that AspTCt has seven transmembrane segments (TMs), a large cytoplasmic loop containing
200 amino acid residues between TM4 and TM5, a cytoplasmic N-terminus, and a periplasmic C-terminus. These results suggest that the orientation of the N-terminus of AspTCt differs from that of tetragenococcal AspT, even though these two AspT orthologues catalyse the same transport reactions.
Key Words: aspartate:alanine antiporter, bacteria, bioenergetics, fusion methods, membrane topology
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